PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG017850.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 614aa MW: 67313.3 Da PI: 6.7344 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.3 | 1.8e-28 | 208 | 261 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl TRIDC7AG017850.2 208 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 261 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 38.9 | 2e-12 | 210 | 260 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I + m+ +++t++++ s++qky+ TRIDC7AG017850.2 210 RVVWSVELHRKFVAAVNQLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 260 678********************************99*************7 PP | |||||||
3 | Response_reg | 79.4 | 1.2e-26 | 26 | 134 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl vdD+p+ +++l+++l++ +y +v+++ ++ al+ll+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++ +ge +++l+ + TRIDC7AG017850.2 26 VLAVDDDPVCLKVLEVLLRRCQY-HVTTTNQAATALRLLRENKdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKTVLKGIT 116 799********************.***************99999********************87754.558******************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ +eel++ TRIDC7AG017850.2 117 HGACDYLLKPVRIEELRN 134 ****************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 614 aa Download sequence |
MLLDAMMMEA RKGLMERDQF PAGMRVLAVD DDPVCLKVLE VLLRRCQYHV TTTNQAATAL 60 RLLRENKDMF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSVNGETKT VLKGITHGAC 120 DYLLKPVRIE ELRNVWQHVV RRKFCNREPN NLDFCKEISR DSYHRLGQAT CDRSSDQSNR 180 ASKKRKEPHC EEEDEGEDND DASAASKKPR VVWSVELHRK FVAAVNQLGI DKAVPKRILE 240 LMNVEKLTRE NVASHLQKYR LYLRRLSAVA SQQASIAAAF GGRDPFLHMG AFEGLHSYHQ 300 PFGPSAAPPS FNPHGLLSGA GATTFGLQDL ASPKGIHCAG NNGEVSLQGN KHADLTQGLT 360 ASSFGQPRLQ QEWIHQETND LCSVFSGGAL ANTMRGTFQR ITSSSLPPED LLECTPHIKV 420 GAHPSVGIQN ASSGLLERSQ QGALPVGDGF SVDKLPLHIS FDGAIATKLD ASFVTEEQGM 480 DQKGIFSERM TVGVCPSESL IAASSGRCGA SSSGSTRLLP PHDTDRHSKY LQFGVASNSR 540 HRMDGGMRQD QRLNNGDFSY DGGAIVPEQT DVYDLGISKL QGQGALNSSS CNFDGLLNSI 600 VKVENRHVMT ILPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-110 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG017850.2 |