PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG017250.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 381aa    MW: 41689.6 Da    PI: 5.6455
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG017250.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF31.81.8e-102470349
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      i ++  r vtf kRr g++K    LS  ++a+vav++  ++ +++ +
  TRIDC7AG017250.1 24 IHDDKERDVTFFKRRGGLFKSIAGLSAVTGARVAVVLETENETMHSF 70
                      88999***************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
LFLVVSFFVL VGFSMPRRSA IAYIHDDKER DVTFFKRRGG LFKSIAGLSA VTGARVAVVL  60
ETENETMHSF GTPSADPIVD AFLSGAPLAV PLDDEATTAR IAQLQSEVAR LDMNCMKEYK  120
ENQLSIERMK QIQEQCPGMA ANHIFSKEED LSPGDLNNLS NEISRVHEDI GHRLPQLHHG  180
HKAMTGRASI KQNMLPSSGP PSDRMRTTPS SVHSLWDHHL PQHQMHSSPL PSPPGHIMAP  240
GFSQVPPIFH PASSPLVPQL ASQQETAPNQ AHELPPPQDI SVKDYVSPCN PVNPQQNDAN  300
SNSTSRYNLA VSPLLVYSGG NDFTVNDPFV YESWGYALSD QPFRDEYIEK DASLGYNGAD  360
VGQSSMGNGG WVDKPPESSS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22630.12e-10MIKC_MADS family protein