PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG015820.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 394aa MW: 45900.3 Da PI: 7.2345

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG015820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.3	4.7e-22	70	150	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn+YA +vGFs+rk+++k++ ++g+i++++ vCs++g+re+e++k +trt+C+a+++ + +++g w v+k++++HnH la TRIDC7AG015820.1 70 DMYNTYAGKVGFSIRKNQTKRR-HDGTIYQKRIVCSNQGHRETESSK--------DTTRTDCNARIQFSVSREGIWTVQKVVTDHNHYLA 150 58************998776.9999**********998877........99****************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
DNSRCSKLYR PSYTMSEATT CTMDLPPPQV MSGGGQQDDA VTDGRGENGE QTIQVPEVGK 60 TFESEKDAYD MYNTYAGKVG FSIRKNQTKR RHDGTIYQKR IVCSNQGHRE TESSKDTTRT 120 DCNARIQFSV SREGIWTVQK VVTDHNHYLA SPNKVHKLRS QRRVIEADRH LIGQIREAGM 180 KPSQVYDFMV AFYGGPDKVP FAKMDCNNEI GRERKKYLES NDSQTLLEYL KNKQREDPTF 240 FYAIQVDEKD GRIANFFWAD GQSEYKFNKK WHELLDRYNL QDNEWMAKLY ELREKWAAVY 300 RDSFTADMNL TQRSEECEKV SHSLRENELD ADFSSRRKNP ITYSSKLPLL KTASESYTRR 360 MYSEFEEEFT GQFLMSCKLL QTEGSVLTYM VTHM

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

DNSRCSKLYR PSYTMSEATT CTMDLPPPQV MSGGGQQDDA VTDGRGENGE QTIQVPEVGK  60
TFESEKDAYD MYNTYAGKVG FSIRKNQTKR RHDGTIYQKR IVCSNQGHRE TESSKDTTRT  120
DCNARIQFSV SREGIWTVQK VVTDHNHYLA SPNKVHKLRS QRRVIEADRH LIGQIREAGM  180
KPSQVYDFMV AFYGGPDKVP FAKMDCNNEI GRERKKYLES NDSQTLLEYL KNKQREDPTF  240
FYAIQVDEKD GRIANFFWAD GQSEYKFNKK WHELLDRYNL QDNEWMAKLY ELREKWAAVY  300
RDSFTADMNL TQRSEECEKV SHSLRENELD ADFSSRRKNP ITYSSKLPLL KTASESYTRR  360
MYSEFEEEFT GQFLMSCKLL QTEGSVLTYM VTHM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-38	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG015820.1