PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG014310.16 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 26316.8 Da PI: 8.3048 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.7 | 3.1e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri+nk+ rqvtf+kRrng+lKKA+ELS LCdaeva+iifs +g+l+e+s+ TRIDC7AG014310.16 9 KRIDNKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSARGRLFEFST 59 79***********************************************96 PP | |||||||
2 | K-box | 92.4 | 7.6e-31 | 85 | 172 | 13 | 100 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ s +qe+ kLk ++e Lq++qR+llGedL++L++keL+qLe+q+e slk+iR++K++ l+q+ el++ke++lq+ nk+Lrkk++e TRIDC7AG014310.16 85 TELSNYQEYLKLKTRVEFLQTTQRNLLGEDLGPLNMKELEQLENQIEISLKHIRATKSQQSLDQLFELKRKEQQLQDVNKDLRKKIQE 172 3456789*******************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MGRGKVELKR IDNKISRQVT FAKRRNGLLK KAYELSLLCD AEVALIIFSA RGRLFEFSTS 60 SRMYKTLERY RSCNFNSEAT ATPETELSNY QEYLKLKTRV EFLQTTQRNL LGEDLGPLNM 120 KELEQLENQI EISLKHIRAT KSQQSLDQLF ELKRKEQQLQ DVNKDLRKKI QETSADSVLQ 180 MFCQDVGPSG SSGHANQANQ QEYFHPDCDP SLRMGYDHAY LDHLNKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15800.1 | 3e-77 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG014310.16 |