PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG012640.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 367aa MW: 39076.7 Da PI: 5.0484

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG012640.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.7	2.1e-07	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ ++ e++ C ++ lC+ C +e H H++vpl TRIDC7AG012640.3 4 QCNACGAAEARVLCCADEAALCAACDEEVHAAnrlagkHQRVPL 47 7****99*******************66789999999986 PP
2	zf-B_box	20	1.5e-06	55	94	4	35
zf-B_box 4 rkCpeHe........ekelqlfCedCqqllCedClleeHk 35 +kC+ ++ e +fC +++ llC+dC +++H TRIDC7AG012640.3 55 PKCDICQaglilgchEASGYFFCLEDRALLCRDCDVAIHT 94 56777777777776577789******************93 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MKIQCNACGA AEARVLCCAD EAALCAACDE EVHAANRLAG KHQRVPLLPD AAAPPKCDIC 60 QAGLILGCHE ASGYFFCLED RALLCRDCDV AIHTVNSFVS AHQRFLLTGV QVGLDPADPV 120 PPVADKHVNT SGGSVDSLPK HLPKKNPTAL FSGENSASIP SQNAISGDYS RQISAPNTKT 180 GMTNWTMDNS ALRLAEPPPK YLSDGNSKLL LSNQTTTALS NQMNRDSGRA YNLPFSGGNG 240 SDSLPDWPVD EFFSNLEYGP NFGFTEHGSS KGDNAKLGSA GGSPQCRLAE GLFAEDLLGQ 300 VPGLDAEDPW VVPEVPSPPT ASGLCWQGNL HYPVYDGAMF VPEAPSLQSS QDHFTASAGF 360 KRRRREF

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MKIQCNACGA AEARVLCCAD EAALCAACDE EVHAANRLAG KHQRVPLLPD AAAPPKCDIC  60
QAGLILGCHE ASGYFFCLED RALLCRDCDV AIHTVNSFVS AHQRFLLTGV QVGLDPADPV  120
PPVADKHVNT SGGSVDSLPK HLPKKNPTAL FSGENSASIP SQNAISGDYS RQISAPNTKT  180
GMTNWTMDNS ALRLAEPPPK YLSDGNSKLL LSNQTTTALS NQMNRDSGRA YNLPFSGGNG  240
SDSLPDWPVD EFFSNLEYGP NFGFTEHGSS KGDNAKLGSA GGSPQCRLAE GLFAEDLLGQ  300
VPGLDAEDPW VVPEVPSPPT ASGLCWQGNL HYPVYDGAMF VPEAPSLQSS QDHFTASAGF  360
KRRRREF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	9e-55	DBB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG012640.3