PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG012640.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 368aa MW: 39210.9 Da PI: 5.0399

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG012640.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.7	2.1e-07	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ ++ e++ C ++ lC+ C +e H H++vpl TRIDC7AG012640.1 4 QCNACGAAEARVLCCADEAALCAACDEEVHAAnrlagkHQRVPL 47 7****99*******************66789999999986 PP
2	zf-B_box	19.4	2.2e-06	76	95	16	35
zf-B_box 16 lfCedCqqllCedClleeHk 35 +fC +++ llC+dC +++H TRIDC7AG012640.1 76 FFCLEDRALLCRDCDVAIHT 95 9*****************93 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MKIQCNACGA AEARVLCCAD EAALCAACDE EVHAANRLAG KHQRVPLLPD AAAPPNGSCC 60 PVMHACFILL EASGYFFCLE DRALLCRDCD VAIHTVNSFV SAHQRFLLTG VQVGLDPADP 120 VPPVADKHVN TSGGSVDSLP KHLPKKNPTA LFSGENSASI PSQNAISGDY SRQISAPNTK 180 TGMTNWTMDN SALRLAEPPP KYLSDGNSKL LLSNQTTTAL SNQMNRDSGR AYNLPFSGGN 240 GSDSLPDWPV DEFFSNLEYG PNFGFTEHGS SKGDNAKLGS AGGSPQCRLA EGLFAEDLLG 300 QVPGLDAEDP WVVPEVPSPP TASGLCWQGN LHYPVYDGAM FVPEAPSLQS SQDHFTASAG 360 FKRRRREF

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MKIQCNACGA AEARVLCCAD EAALCAACDE EVHAANRLAG KHQRVPLLPD AAAPPNGSCC  60
PVMHACFILL EASGYFFCLE DRALLCRDCD VAIHTVNSFV SAHQRFLLTG VQVGLDPADP  120
VPPVADKHVN TSGGSVDSLP KHLPKKNPTA LFSGENSASI PSQNAISGDY SRQISAPNTK  180
TGMTNWTMDN SALRLAEPPP KYLSDGNSKL LLSNQTTTAL SNQMNRDSGR AYNLPFSGGN  240
GSDSLPDWPV DEFFSNLEYG PNFGFTEHGS SKGDNAKLGS AGGSPQCRLA EGLFAEDLLG  300
QVPGLDAEDP WVVPEVPSPP TASGLCWQGN LHYPVYDGAM FVPEAPSLQS SQDHFTASAG  360
FKRRRREF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	3e-50	DBB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG012640.1