PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG011210.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Whirly
Protein Properties Length: 189aa    MW: 21381.4 Da    PI: 9.2618
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG011210.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly193.82.6e-60141521139
            Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrka 93 
                       s+yk+kaal  +++ p+f+ l+sg+ k+ ++G++ll++a+a+++r+ydW +kq+f+ls+ e+++l+ l+  +sceffhdp+++ s+eGkvrk+
  TRIDC7AG011210.2  14 SIYKGKAALAFDPRPPQFVPLESGAYKVAKEGFVLLQFAPAVGPRQYDWTRKQVFSLSVWEMGTLLTLGLTDSCEFFHDPFKGRSDEGKVRKV 106
                       7******************************************************************************************** PP

            Whirly  94 lkvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                       lkveP pdG G f+nlsv+n l++++e++++P++k+e+av+ s ++
  TRIDC7AG011210.2 107 LKVEPTPDGNGRFFNLSVQNRLLNVDENIYIPITKGEYAVIVSTFN 152
                       *****************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
VPGGQAGRVF ASYSIYKGKA ALAFDPRPPQ FVPLESGAYK VAKEGFVLLQ FAPAVGPRQY  60
DWTRKQVFSL SVWEMGTLLT LGLTDSCEFF HDPFKGRSDE GKVRKVLKVE PTPDGNGRFF  120
NLSVQNRLLN VDENIYIPIT KGEYAVIVST FNYIIPHIMG WSTFTNSIKP EESQPYNRPQ  180
SSPELEWRR