PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG009990.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 384aa    MW: 44268.4 Da    PI: 6.4261
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG009990.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.77.8e-12611411399
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       ++ +++p + +++++ +     +++le+++g    + +   k  ++ ++t GW++Fv   +L+ gD ++F+++g+s+f  +v +f+k
  TRIDC7AG009990.4  61 RDEMIIPEELVQRFKRD--ILGEIKLETRNGDNHAIVV--AKIEEKRIFTVGWRQFVANYDLQIGDLLMFRYKGNSQF--NVIIFDK 141
                       56799******999766..4458***************..888888899*************************9*99..8888875 PP
2B335.42e-112112951599
                       -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        +v+p   +++++g+   +++++le+++ rs+++ ++       + ++ v++ GW +Fv+  gL++gD++v+ ++g+s+f   v +f+k
  TRIDC7AG009990.4 211 EMVIPEGILQRFKGE--FPREIKLETQNRRSYKIGVTEnkldICYNQKLVFSVGWGKFVETFGLQAGDTIVLIYNGNSQF--SVIIFDK 295
                       589999999999877..7789***************6544532234459***************************9999..8888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
AHTAQRRHLH TSGSHLEGEQ RACSNGMCTS CECCKRRDEY YYRNLDDEKK YFLVLLIGDF  60
RDEMIIPEEL VQRFKRDILG EIKLETRNGD NHAIVVAKIE EKRIFTVGWR QFVANYDLQI  120
GDLLMFRYKG NSQFNVIIFD KLGREKASSV VLDPFIPRVQ DRGNEAHEIG SSEKMDVQCG  180
RCNNWLEYHY ADLDNENKYF LMLMMGDFQY EMVIPEGILQ RFKGEFPREI KLETQNRRSY  240
KIGVTENKLD ICYNQKLVFS VGWGKFVETF GLQAGDTIVL IYNGNSQFSV IIFDKHGCEK  300
AISVIVDPVP PPVQERRPYG TDIVKSSHFY PQPMQRQSFI VVNGLPVESL PIEGQWRAQL  360
EMDKSCQGSR AAINTPPSES SGLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-13B3 family protein