PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG009990.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 524aa    MW: 60333.2 Da    PI: 8.1808
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG009990.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3361.3e-11351151399
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       ++ +++p + +++++ +     +++le+++g    + +   k  ++ ++t GW++Fv   +L+ gD ++F+++g+s+f  +v +f+k
  TRIDC7AG009990.2  35 RDEMIIPEELVQRFKRD--ILGEIKLETRNGDNHAIVV--AKIEEKRIFTVGWRQFVANYDLQIGDLLMFRYKGNSQF--NVIIFDK 115
                       56799******999766..4458***************..888888899*************************9*99..8888875 PP
2B334.63.3e-111852691599
                       -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        +v+p   +++++g+   +++++le+++ rs+++ ++       + ++ v++ GW +Fv+  gL++gD++v+ ++g+s+f   v +f+k
  TRIDC7AG009990.2 185 EMVIPEGILQRFKGE--FPREIKLETQNRRSYKIGVTEnkldICYNQKLVFSVGWGKFVETFGLQAGDTIVLIYNGNSQF--SVIIFDK 269
                       589999999999877..7789***************6544532234459***************************9999..8888876 PP
3B345.41.5e-14427516197
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+ v+ + +v +   l++p+ +a+++ g++++   +    + g +W+v++   +++g   l+ GWk+Fv+ n+Lk gD+++F+l ++ + ++v
  TRIDC7AG009990.2 427 FVAVMYKCNVESPFFLTFPNYYAQKYLGEEAR---MH-LELLGVKWQVRF--PNNRGDKKLKHGWKQFVQGNNLKMGDICLFELLSN-QSTMV 512
                       5667777788888999**********666443...33.34678*******..99999999***********************9985.55578 PP

                       EEEE CS
                B3  94 vkvf 97 
                       v v+
  TRIDC7AG009990.2 513 VYVI 516
                       8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MCTSCECCKR RDEYYYRNLD DEKKYFLVLL IGDFRDEMII PEELVQRFKR DILGEIKLET  60
RNGDNHAIVV AKIEEKRIFT VGWRQFVANY DLQIGDLLMF RYKGNSQFNV IIFDKLGREK  120
ASSVVLDPFI PRVQDRGNEA HEIGSSEKMD VQCGRCNNWL EYHYADLDNE NKYFLMLMMG  180
DFQYEMVIPE GILQRFKGEF PREIKLETQN RRSYKIGVTE NKLDICYNQK LVFSVGWGKF  240
VETFGLQAGD TIVLIYNGNS QFSVIIFDKH GCEKAISVIV DPVPPPVQER RPYGTDIVKS  300
SHFYPQPMQR QSFIVVNGLP VESLPIEGQW RAQLEMDKSC QGSRAAINTP PSESSGLRGS  360
LSSEHGQGVR DVPVSSNIVK RKAKLSSSQK EQLRDGYITA HKTKLTLAQK DVVKQKVQSL  420
ESKISIFVAV MYKCNVESPF FLTFPNYYAQ KYLGEEARMH LELLGVKWQV RFPNNRGDKK  480
LKHGWKQFVQ GNNLKMGDIC LFELLSNQST MVVYVIPAND ANVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-14B3 family protein