PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC7AG005090.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 368aa MW: 39902.3 Da PI: 8.8065

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG005090.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.3	1.6e-24	108	152	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep+rCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC7AG005090.3 108 DPEPWRCRRTDGKKWRCSKEAHPDSKYCERHMHRGRNRSRKPVES 152 79****************************************986 PP
2	QLQ	63.2	6.8e-22	35	69	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 FT+aQ+++L++Q+l+yKyL+a++PvPp+Ll++i+ TRIDC7AG005090.3 35 VFTPAQWAELEQQALIYKYLMAGVPVPPDLLLPIR 69 5********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MLSSSAAMGM GLGGYGQQQQ QQQMQMQMQR GAGPVFTPAQ WAELEQQALI YKYLMAGVPV 60 PPDLLLPIRP HPAGAGATFS FANPAASPFY HHHHPSMSYY AYYGKKLDPE PWRCRRTDGK 120 KWRCSKEAHP DSKYCERHMH RGRNRSRKPV ESKSASPAHQ SQQPPLSAVT SATRDAEPLP 180 SLPAGAKTHG LSLGGAGSSQ MHVDASSYGN KYSLGAKSDV GELSFFSGAS GNNNRGFTID 240 SPTDSSWHSM GSSLPPYQLS KPRDSGLMQG GFSYSHFEPS QELGQVTIAS LSHSQEQDRR 300 SFGGGGGGGG GGAGLMGNVK QENQPLRPFF DEWPGRRDSW SEMDDERSNG TSFSTTQLSI 360 SIPMPRCD

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MLSSSAAMGM GLGGYGQQQQ QQQMQMQMQR GAGPVFTPAQ WAELEQQALI YKYLMAGVPV  60
PPDLLLPIRP HPAGAGATFS FANPAASPFY HHHHPSMSYY AYYGKKLDPE PWRCRRTDGK  120
KWRCSKEAHP DSKYCERHMH RGRNRSRKPV ESKSASPAHQ SQQPPLSAVT SATRDAEPLP  180
SLPAGAKTHG LSLGGAGSSQ MHVDASSYGN KYSLGAKSDV GELSFFSGAS GNNNRGFTID  240
SPTDSSWHSM GSSLPPYQLS KPRDSGLMQG GFSYSHFEPS QELGQVTIAS LSHSQEQDRR  300
SFGGGGGGGG GGAGLMGNVK QENQPLRPFF DEWPGRRDSW SEMDDERSNG TSFSTTQLSI  360
SIPMPRCD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-38	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG005090.3