PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG070380.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 149aa MW: 15265.3 Da PI: 6.7734

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG070380.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00025	32	54	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H TRIDC6BG070380.1 32 HECSICGAEFASGQALGGHMRRH 54 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence
VDAAPDVTTV LSLNNGGSAV CNAVNTNRLR VHECSICGAE FASGQALGGH MRRHRPLHAP 60 ADRVTTTTAA AVTAITASTT KKDSTPAGIN LELDLNLPAP SDEECVSHPP PPPPPSSAPP 120 VVLGLGPFDS GKKRLMLTAA SAALVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	7e-19	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG070380.1