PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC6BG069070.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 708aa MW: 81568.5 Da PI: 5.5533

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG069070.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.8	9.9e-20	96	180	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA ++GF v++ +++k+ + ++ C+++ k + ++ +++r++++ ++t+C+ak+ vk+ +g+w+++ +++eHnH+l+p TRIDC6BG069070.3 96 EYYNTYALQTGFVVVRGRNYKR------QRFQLDCNRNRKVKLVEDLnLKRKRKKNVIEKTNCQAKIIVKLI-KGEWVIAAVQNEHNHPLSP 180 69*****************9......4677**9988755543799999**************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MDDDEEAALA LQVKLERSAS YADRSLQLQT AEEHDVMEID DISSDDTGSE SDSDISSGSE 60 SEKDEGKFFY PAPEALGTVK APQVGMKFPT LEDAHEYYNT YALQTGFVVV RGRNYKRQRF 120 QLDCNRNRKV KLVEDLNLKR KRKKNVIEKT NCQAKIIVKL IKGEWVIAAV QNEHNHPLSP 180 SRSFTRFLTS QKHMSPEERS FSRVLQQSRV PPGEILKILR RMSGFFRELP SKEKQALILQ 240 SAEQWRKANI DVEKTLNHLE ELQLQDPCFF YTVQKDEDGM LRSIFWTDAR SRMDYEIFGD 300 FVSFDTTFST NRHSMPFVPI TGMNNRGRTI VLGCALLQDR KAETYKWMLQ TFLQEMGGGQ 360 TPRSVITSQD EAMAKAIAEV MPQARHRFCR WNGKAQEKMA AFVAARGNMK AELDILVDNS 420 LTETEFEQGW SALIQRHDAS ENEYLQLLWE MRKTWAPVYF MQDFFPFVVS ARGSQGAFSL 480 FKENVLPKDK IENLIEKYEE MQDKIKKTDE EDALEAATEP SCFSLQPIER HASRVYTRQI 540 FLKVQKELLH STAFKVQEIE RGALYRLDKA SSYENPEYDR DSFEVLIEPG VTDTYTCQCA 600 KFARDGILCC HVFRLFTQFG IDEIPEKYIV ARWTDGFREE QLERREEGRL VAAARREEDA 660 ARYAALMSKA AGIGREICGD GAKCDAFMLE LDRIREKMAT MAMANDHV

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MDDDEEAALA LQVKLERSAS YADRSLQLQT AEEHDVMEID DISSDDTGSE SDSDISSGSE  60
SEKDEGKFFY PAPEALGTVK APQVGMKFPT LEDAHEYYNT YALQTGFVVV RGRNYKRQRF  120
QLDCNRNRKV KLVEDLNLKR KRKKNVIEKT NCQAKIIVKL IKGEWVIAAV QNEHNHPLSP  180
SRSFTRFLTS QKHMSPEERS FSRVLQQSRV PPGEILKILR RMSGFFRELP SKEKQALILQ  240
SAEQWRKANI DVEKTLNHLE ELQLQDPCFF YTVQKDEDGM LRSIFWTDAR SRMDYEIFGD  300
FVSFDTTFST NRHSMPFVPI TGMNNRGRTI VLGCALLQDR KAETYKWMLQ TFLQEMGGGQ  360
TPRSVITSQD EAMAKAIAEV MPQARHRFCR WNGKAQEKMA AFVAARGNMK AELDILVDNS  420
LTETEFEQGW SALIQRHDAS ENEYLQLLWE MRKTWAPVYF MQDFFPFVVS ARGSQGAFSL  480
FKENVLPKDK IENLIEKYEE MQDKIKKTDE EDALEAATEP SCFSLQPIER HASRVYTRQI  540
FLKVQKELLH STAFKVQEIE RGALYRLDKA SSYENPEYDR DSFEVLIEPG VTDTYTCQCA  600
KFARDGILCC HVFRLFTQFG IDEIPEKYIV ARWTDGFREE QLERREEGRL VAAARREEDA  660
ARYAALMSKA AGIGREICGD GAKCDAFMLE LDRIREKMAT MAMANDHV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	145	LKRKRKKN
2	140	144	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-76	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG069070.3