PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG067880.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 323aa    MW: 35530.3 Da    PI: 7.0447
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG067880.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-08228277147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                       r++++  E ellv+av++lG g+Wk + ++     + Rt  ++k++w ++
  TRIDC6BG067880.3 228 RKPFSVAEVELLVEAVELLGFGRWKNVKNHAFrdnEERTYVDLKDKWKNL 277
                       7899***************************99**99**********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MQRMLKTKKV VECYSAQPSD EGVLTETSGT SCSRGGQDPT CASESSQRKP CASEGCNVKF  60
IIKSFNIPEL SIEVPENATV GSLKRIVMDA VTSKIEGSLS VSVLLQGEII QDDNKTLHQA  120
GICHGAKPDS IGFTLECEAK QDSRPSGLAP EEMDSAGPSV VNPLSKIKFE QPFISCTLGD  180
YPCEGAAQVR SEICQAIVPY GTSNPDALAI VPVVPRSRQR DFGQRRKRKP FSVAEVELLV  240
EAVELLGFGR WKNVKNHAFR DNEERTYVDL KDKWKNLVHT ASIPPQLRRG RAIPPQGLLD  300
RVLAAQAYWT VHHAKRDEEE GRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.13e-60MYB_related family protein