PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG065820.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 297aa    MW: 33145.2 Da    PI: 7.4179
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG065820.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.42.9e-49101491128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                       lppGfrF P+deelv++yL+ kv++++      ++ ++ evd++ +ePw+Lp  +k + +ewyfFs rd+kyatg r+nrat+sgyWkatgkd
  TRIDC6BG065820.3  10 LPPGFRFYPSDEELVCHYLQSKVANQHfagcGGAAGTMVEVDLHVHEPWELPDVAKLSANEWYFFSFRDRKYATGLRTNRATRSGYWKATGKD 102
                       79*************************6664233347***************87788999********************************* PP

               NAM  90 kevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + + s         + + vg++ktLvfy+grap+g+kt Wvmhe+r+
  TRIDC6BG065820.3 103 RVIRSPrssssrsgRATIVGMRKTLVFYRGRAPNGTKTCWVMHEFRI 149
                       ****99665555444444***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MGLRDIEMTL PPGFRFYPSD EELVCHYLQS KVANQHFAGC GGAAGTMVEV DLHVHEPWEL  60
PDVAKLSANE WYFFSFRDRK YATGLRTNRA TRSGYWKATG KDRVIRSPRS SSSRSGRATI  120
VGMRKTLVFY RGRAPNGTKT CWVMHEFRIE NPHSPPKEDW VLCRVFHKKK AETDYAMDGK  180
ADLGSGAVSG SNYLSSSSCH DPEQYHQSPM APFPSIGAGG HNYQLLPCDH QHPHGAAGVS  240
VSDVDPFAVM PQLLSYDSIL DFSQQLHGGR SAAACLRDGA DDQLQVQEEH YKYNSLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.12e-76NAC family protein