PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC6BG065820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 294aa MW: 32724.7 Da PI: 7.4183 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 158.4 | 2.9e-49 | 10 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lppGfrF P+deelv++yL+ kv++++ ++ ++ evd++ +ePw+Lp +k + +ewyfFs rd+kyatg r+nrat+sgyWkatgkd TRIDC6BG065820.1 10 LPPGFRFYPSDEELVCHYLQSKVANQHfagcGGAAGTMVEVDLHVHEPWELPDVAKLSANEWYFFSFRDRKYATGLRTNRATRSGYWKATGKD 102 79*************************6664233347***************87788999********************************* PP NAM 90 kevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + s + + vg++ktLvfy+grap+g+kt Wvmhe+r+ TRIDC6BG065820.1 103 RVIRSPrssssrsgRATIVGMRKTLVFYRGRAPNGTKTCWVMHEFRI 149 ****99665555444444***************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 294 aa Download sequence |
MGLRDIEMTL PPGFRFYPSD EELVCHYLQS KVANQHFAGC GGAAGTMVEV DLHVHEPWEL 60 PDVAKLSANE WYFFSFRDRK YATGLRTNRA TRSGYWKATG KDRVIRSPRS SSSRSGRATI 120 VGMRKTLVFY RGRAPNGTKT CWVMHEFRIE NPHSPPKEDW VLCRVFHKKK AETDYAMDGK 180 ADLGSGAVSG SNYLSSSSCH DPEQYHQSPM APFPSIGAGG HNYQLLPCDH QHPHGAAGVS 240 VSDVDPFAVM PQLLSYDSIL DFSQQLHGGR SAAACLRDGA DDQLQVQEEH YKMG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G28530.1 | 2e-76 | NAC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC6BG065820.1 |