PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG062740.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 309aa    MW: 33771.1 Da    PI: 8.1962
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG062740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF33.17.3e-111050242
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                       i+nks r  t+  R + +  KA ELS+LC+a+++v+++ +
  TRIDC6BG062740.1 10 YIKNKSSRRRTLDTRMKNLASKARELSILCNAKACVLVYDE 50
                      59************************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MARKKIALQY IKNKSSRRRT LDTRMKNLAS KARELSILCN AKACVLVYDE GNAAPKVYPS  60
HAEAVDLLNR YRTMAEGRFK KTVNQEDFLS QRLSKLQVEE NKVRDPEIRI LLHKAMLGSD  120
LPDLKVDELT IVSSRLEEIL KSMGESIAKI SGQPPVLQPQ VPYIPDNVDM GGSSAIYQAS  180
QPAPYVTNNM DMGSFTMNQQ PSPTPYVTGS MYVGSPTMYQ VPPQHEGWLD KVRSGRDLDA  240
LAHNGYNTTR HDGAGTSAGA GYSTNGHDGA GTSANAGSSG GMKPFDVGFG WQSGGVDHEE  300
SSWSLFPPM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.37e-21M-type_MADS family protein