PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG062600.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 172aa    MW: 17423.5 Da    PI: 5.1864
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG062600.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.66.8e-063312255
                      HHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH 22 eLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       L+el+P+a      K +Ka++L + ++Y+k Lq
  TRIDC6BG062600.2  3 ALQELVPSA-----NKTDKASMLDEIIDYVKFLQ 31
                      79******8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MKALQELVPS ANKTDKASML DEIIDYVKFL QLQVKVLSMS RLGGAAAVGP LVAGLSSESS  60
GNGNGTSSSG DGNGDDDNGG STLRATEQQV ARLMEEDMGT AMQYLQGKGL CLMPISLASV  120
ISSATSSSLR SATRPAGNAG GPLHEGGSPA SPRLVNGVGA DGSRTIRDGG RQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.12e-34bHLH family protein