PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC6BG060640.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 690aa MW: 71641.7 Da PI: 10.4185

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG060640.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.3	3.6e-08	80	124	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 ++WT++Ed l +v++ G g+W I r+ + +Rt q+ rw TRIDC6BG060640.6 80 KAWTKDEDAELMAGVHKCGEGNWLDILRKYNfdSTRTYGQLSQRW 124 68*****************************9999999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MYGPSREQGS SHRANSDVPL LNTPNEKIPR VSSDKQLAQS HRLTNGTGPV SNSKQAPHTG 60 LSPDSFDGNG PHNKKTKKTK AWTKDEDAEL MAGVHKCGEG NWLDILRKYN FDSTRTYGQL 120 SQRWAVISKR QATTKPAKAK PVTGGYDMKA TQKAFFMALD MPMGKPGGLS TLRSGASQQS 180 TQHSAPVFGA AAPELKSATS SSFSLPVPVP SAAPGVVSAQ VQVQPPRVQQ APPQAAPSKV 240 SIASIKSRNS SKKQTAQANP TNAPSSIQAA AIAAGGRIAT ASIATNLLKA AQSPQAVHIR 300 SRGKGSSKTS TSSKASTMAG EPGTQTGSAQ HPELLNCSAP TPSPTVLITQ STEQVNVVPE 360 VAGVNPPEQS ASAHLLEPDR TLSTTPVPGP CDNMEIDDDS TFCVVTMEDL FPEDVKQPET 420 VSQPEMVRQP ETVRPPETVS QPEMVRQSET VRQPEMVKQP EMVDPKAEEM IDPKDADMLE 480 FDRFVAQGCL TTDYSDKSKG VKIAPGAQGA TASQKKKQLP TVGKSIPVFR APVIMKKTKA 540 LASHGATLAS TVTSSGLVGT GNAGVLSKAI YRKPAGPGTT GKQNRCQEIM AQKQHAINSN 600 SSAMARNAAP GTGTPARNVA AGVGAPARNA APATGTPAKS AAPATGPSAK NAAPASGTPA 660 RNTAPATGTP PVRNMAPGTG TPPVRNTAPG

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MYGPSREQGS SHRANSDVPL LNTPNEKIPR VSSDKQLAQS HRLTNGTGPV SNSKQAPHTG  60
LSPDSFDGNG PHNKKTKKTK AWTKDEDAEL MAGVHKCGEG NWLDILRKYN FDSTRTYGQL  120
SQRWAVISKR QATTKPAKAK PVTGGYDMKA TQKAFFMALD MPMGKPGGLS TLRSGASQQS  180
TQHSAPVFGA AAPELKSATS SSFSLPVPVP SAAPGVVSAQ VQVQPPRVQQ APPQAAPSKV  240
SIASIKSRNS SKKQTAQANP TNAPSSIQAA AIAAGGRIAT ASIATNLLKA AQSPQAVHIR  300
SRGKGSSKTS TSSKASTMAG EPGTQTGSAQ HPELLNCSAP TPSPTVLITQ STEQVNVVPE  360
VAGVNPPEQS ASAHLLEPDR TLSTTPVPGP CDNMEIDDDS TFCVVTMEDL FPEDVKQPET  420
VSQPEMVRQP ETVRPPETVS QPEMVRQSET VRQPEMVKQP EMVDPKAEEM IDPKDADMLE  480
FDRFVAQGCL TTDYSDKSKG VKIAPGAQGA TASQKKKQLP TVGKSIPVFR APVIMKKTKA  540
LASHGATLAS TVTSSGLVGT GNAGVLSKAI YRKPAGPGTT GKQNRCQEIM AQKQHAINSN  600
SSAMARNAAP GTGTPARNVA AGVGAPARNA APATGTPAKS AAPATGPSAK NAAPASGTPA  660
RNTAPATGTP PVRNMAPGTG TPPVRNTAPG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	1e-11	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG060640.6