PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG060640.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 714aa MW: 74487.8 Da PI: 9.8043

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG060640.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.2	3.8e-08	105	149	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 ++WT++Ed l +v++ G g+W I r+ + +Rt q+ rw TRIDC6BG060640.5 105 KAWTKDEDAELMAGVHKCGEGNWLDILRKYNfdSTRTYGQLSQRW 149 68*****************************9999999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 714 aa Download sequence
GITSAREYQM LWRYIAYGHD FVENVEDGSP QPLGDESDLE CEIEPSPKPS NEAAAEASRF 60 AKILMYGPSR EQGPVSNSKQ APHTGLSPDS FDGNGPHNKK TKKTKAWTKD EDAELMAGVH 120 KCGEGNWLDI LRKYNFDSTR TYGQLSQRWA VISKRQATTK PAKAKPVTGG YDMKATQKAF 180 FMALDMPMGK PGGLSTLRSG ASQQSTQHSA PVFGAAAPEL KSATSSSFSL PVPVPSAAPG 240 VVSAQVQVQP PRVQQAPPQA APSKVSIASI KSRNSSKKQT AQANPTNAPS SIQAAAIAAG 300 GRIATASIAT NLLKAAQSPQ AVHIRSRGKG SSKTSTSSKA STMAGEPGTQ TGSAQHPELL 360 NCSAPTPSPT VLITQSTEQV NVVPEVAGVN PPEQSASAHL LEPDRTLSTT PVPGPCDNME 420 IDDDSTFCVV TMEDLFPEDV KQPETVSQPE MVRQPETVRP PETVSQPEMV RQSETVRQPE 480 MVKQPEMVDP KAEEMIDPKD ADMLEFDRFV AQGCLTTDYS DKSKGVKIAP GAQGATASQK 540 KKQLPTVGKS IPVFRAPVIM KKTKALASHG ATLASTVTSS GLVGTGNAGV LSKAIYRKPA 600 GPGTTGKQNR CQEIMAQKQH AINSNSSAMA RNAAPGTGTP ARNVAAGVGA PARNAAPATG 660 TPAKSAAPAT GPSAKNAAPA SGTPARNTAP ATGTPPVRNM APGTGTPPVR NTAP

Sequence ? help Back to Top

Protein Sequence Length: 714 aa Download sequence

GITSAREYQM LWRYIAYGHD FVENVEDGSP QPLGDESDLE CEIEPSPKPS NEAAAEASRF  60
AKILMYGPSR EQGPVSNSKQ APHTGLSPDS FDGNGPHNKK TKKTKAWTKD EDAELMAGVH  120
KCGEGNWLDI LRKYNFDSTR TYGQLSQRWA VISKRQATTK PAKAKPVTGG YDMKATQKAF  180
FMALDMPMGK PGGLSTLRSG ASQQSTQHSA PVFGAAAPEL KSATSSSFSL PVPVPSAAPG  240
VVSAQVQVQP PRVQQAPPQA APSKVSIASI KSRNSSKKQT AQANPTNAPS SIQAAAIAAG  300
GRIATASIAT NLLKAAQSPQ AVHIRSRGKG SSKTSTSSKA STMAGEPGTQ TGSAQHPELL  360
NCSAPTPSPT VLITQSTEQV NVVPEVAGVN PPEQSASAHL LEPDRTLSTT PVPGPCDNME  420
IDDDSTFCVV TMEDLFPEDV KQPETVSQPE MVRQPETVRP PETVSQPEMV RQSETVRQPE  480
MVKQPEMVDP KAEEMIDPKD ADMLEFDRFV AQGCLTTDYS DKSKGVKIAP GAQGATASQK  540
KKQLPTVGKS IPVFRAPVIM KKTKALASHG ATLASTVTSS GLVGTGNAGV LSKAIYRKPA  600
GPGTTGKQNR CQEIMAQKQH AINSNSSAMA RNAAPGTGTP ARNVAAGVGA PARNAAPATG  660
TPAKSAAPAT GPSAKNAAPA SGTPARNTAP ATGTPPVRNM APGTGTPPVR NTAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	6e-26	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG060640.5