PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC6BG058690.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 336aa MW: 35376.2 Da PI: 6.2719

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG058690.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.8e-12	105	156	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r +h ++Er+RR+++N+ + Lr+l+P + + + + a+i A++Y+k+L+ TRIDC6BG058690.1 105 QRLTHIAVERNRRRQMNEYLGVLRSLMPAS---YVHRGDQASIIGGAINYVKELE 156 699*************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
GFFGRCAMAA EGVGGGGGFW GGNGHGHGGG MDLDGSNAHC GAAVASTEAP EGSSSLPALL 60 PPGHGGDRGD ADDGAVGAAS ASGAAGRRKR RRARSVKNIE EAESQRLTHI AVERNRRRQM 120 NEYLGVLRSL MPASYVHRGD QASIIGGAIN YVKELEQLVQ SLEAHRHAPL RDDCPVSGDV 180 STAVVPFADF FTFPQYTMSV RHAPEAAAAT AEAADALADD GRGNAADGDT TSGSKQSAVA 240 DIEVTIVESH ASLKVLSRRR PRQLLRIVAG LQGHRLAVLH LNATSAGHMA LYCLSLKVED 300 DCRLSSVDDI AAAVHRIVET IEREEEEEQR QQQSCT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	92	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	3e-64	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG058690.1