PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG057930.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 229aa    MW: 24069.5 Da    PI: 4.584
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG057930.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-182978255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  TRIDC6BG057930.3 29 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLRG 78
                      69****998.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
PQGGLGGDGG NAVAARQGGG GGGRQQQQQY KGVRMRSWGS WVSEIRAPNQ KTRIWLGSYS  60
TAEAAARAYD AALLCLRGSA ADLNFPVHLP FHVPAGAMSP KSIQRVAAAA AASASSSPLQ  120
PPHTMASSAS WPGAAPPCGY GDNASSFGSP EDRSARHSNA DDDETMAHGD DGVDYDALAD  180
IDAFFQSPKC MDYAMMMDPC STFFAPAPMA PVEWEEEGEI SLWSFSSYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.17e-27ERF family protein