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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG056050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 188aa MW: 19583 Da PI: 8.7928 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.7e-19 | 108 | 159 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 s+++GVr+++ +g+W+AeIrdp + r +lg+f+ta +Aa+a++ a+++++g+ TRIDC6BG056050.1 108 SKFRGVRQRS-WGKWAAEIRDP-----HraVRKWLGTFDTAVDAARAYDLAALEFRGH 159 79*****999.**********7.....338**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MAPRLERGGS GFQLPNSELE DSLFLRALIS VVNGDAVVPT LHLEPSSTPH IAAAVPACAS 60 CGVDGCIGCM FVAAAAPAGS SSEGEGCSAA SFVKGGGVGK ITRRRSWSKF RGVRQRSWGK 120 WAAEIRDPHR AVRKWLGTFD TAVDAARAYD LAALEFRGHR ARLNFPDVAA SASASSSFSD 180 SSSAAAQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33710.1 | 3e-21 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG056050.1 |