PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG055910.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 365aa MW: 40344.1 Da PI: 4.8935 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.9 | 5.6e-19 | 48 | 95 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l d+++++G g+W++ ++ g++R++k+c++rw +yl TRIDC6BG055910.1 48 KGPWTPEEDQKLTDYIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 95 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 58.2 | 1.8e-18 | 101 | 146 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++l TRIDC6BG055910.1 101 RGKFTPEEEQTILQLHSVLGNK-WSAIAKHLP-GRTDNEIKNFWNTHL 146 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence |
TGNPKDQARE ERQIALSPSF PPAPSYPNSI SILSMGRSPC CDENGLKKGP WTPEEDQKLT 60 DYIEKHGHGS WRALPKLAGL NRCGKSCRLR WTNYLRPDIK RGKFTPEEEQ TILQLHSVLG 120 NKWSAIAKHL PGRTDNEIKN FWNTHLKKKL IQMGFDPMTH RPRTDFFAAL PQLIALANLR 180 QLVEQRPWDD QSASQLQADA VQAAKLEYLQ CLLQSAAAIA TSPSSSSINT IPTDLEQIGL 240 LSPSQMSSLS SLSSPRIMEG INGQDLVSEQ VPDIQIPSSS FFEHEQPIIN GTNQNSDYSA 300 NSGEGENGTQ KPLLLSEDSL PPLTDFPISN LGDACSTSSC DAEGNSTQLP IWSDSFYDEF 360 MSEFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 1e-104 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG055910.1 |