PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG054700.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 343aa MW: 38008.1 Da PI: 8.7571 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 48.5 | 1.4e-15 | 5 | 48 | 23 | 71 |
E2F_TDP 23 givtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 + + l++++++L v +rRRiYDi+NVLe+++++++k+kn+++w+g TRIDC6BG054700.5 5 ESIGLDDASRRL---GV--ERRRIYDIVNVLESVGILARKAKNRYSWIG 48 56899*******...99..****************************98 PP | |||||||
2 | E2F_TDP | 79.2 | 3.8e-25 | 127 | 206 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek....kekneirwkg 71 rkeksL+lltq+f+kl+ + e +++l+e+ak L+ e ++++k+RR+YDi+NVL++l+liek ++k+++rw g TRIDC6BG054700.5 127 RKEKSLGLLTQNFVKLFLTMEVSTISLDEAAKFLLGEdheesNMRTKVRRLYDIANVLSSLKLIEKtqvdTRKPAFRWLG 206 79**********************************9*******************************999*******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
RDGVESIGLD DASRRLGVER RRIYDIVNVL ESVGILARKA KNRYSWIGFG GVPMALRELK 60 ERALREKSGL APPPAEELSA ANMSDDEDDD KLGVPEAETE GEKLSQTVDN PSDMPDAPPC 120 RLRSDHRKEK SLGLLTQNFV KLFLTMEVST ISLDEAAKFL LGEDHEESNM RTKVRRLYDI 180 ANVLSSLKLI EKTQVDTRKP AFRWLGMAGK PKAENGVTIV ASPASKTLSN KRVFGTELTN 240 IGINRSKLEP TIQKKAKLAQ GGADILKNHN VAAQKQPGQV NKSGFVYGPF HPSCARKQEP 300 DECNNVGQKA IAHDWESLAD SFRPQYQNPG WYLSALLWSG FVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.1 | 4e-75 | E2F/DP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG054700.5 |