PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC6BG051820.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 462aa MW: 49708.8 Da PI: 7.8964

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG051820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52	1.2e-16	213	262	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR +iN++++ Lr+llP++ ++K +Ka+ L +++eYI+ Lq TRIDC6BG051820.1 213 RSKHSATEQRRRTKINDRLDILRDLLPNC----DQKRDKASFLLEVIEYIRLLQ 262 889***********************9....9***************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
SRSADYNKLC QPNPLNIPSA STGVVQSTSQ QQDPGTVIPA AAATAGGPDR SPEPPAVPAM 60 ELFQGEEPAH DFLSLRAGGS SAFQHGQRSG QQGLKSLEPS NGAGNAGDGA ASSAPGLGEH 120 VLPGGVGTFS IRQVPDAQRR VEAGIGREPS VSVSHGSRME IAHEARSGIM VRSAPPTPTM 180 WQDSSTDNKR SRGSRAEGRS SGSSADQDPS SPRSKHSATE QRRRTKINDR LDILRDLLPN 240 CDQKRDKASF LLEVIEYIRL LQEKCQKYES GIPEQNNVDA NCMPWDKVYY RSRWRNTQNI 300 SQAQGGGLSA TTEDMNKEQY SSKGIASAPA ASLFNTQSAR EISTAPGSSQ NIAENSMPTN 360 QLPWLSMSTM NQNCDASNGL LSKHDTQMPQ DDSQSLSSAY SQGLLHKLKE ALQKSGVDPS 420 QTKISVEINM DRRARANAHI HDSSKATEGK EPVHVAKRLR CD

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

SRSADYNKLC QPNPLNIPSA STGVVQSTSQ QQDPGTVIPA AAATAGGPDR SPEPPAVPAM  60
ELFQGEEPAH DFLSLRAGGS SAFQHGQRSG QQGLKSLEPS NGAGNAGDGA ASSAPGLGEH  120
VLPGGVGTFS IRQVPDAQRR VEAGIGREPS VSVSHGSRME IAHEARSGIM VRSAPPTPTM  180
WQDSSTDNKR SRGSRAEGRS SGSSADQDPS SPRSKHSATE QRRRTKINDR LDILRDLLPN  240
CDQKRDKASF LLEVIEYIRL LQEKCQKYES GIPEQNNVDA NCMPWDKVYY RSRWRNTQNI  300
SQAQGGGLSA TTEDMNKEQY SSKGIASAPA ASLFNTQSAR EISTAPGSSQ NIAENSMPTN  360
QLPWLSMSTM NQNCDASNGL LSKHDTQMPQ DDSQSLSSAY SQGLLHKLKE ALQKSGVDPS  420
QTKISVEINM DRRARANAHI HDSSKATEGK EPVHVAKRLR CD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-31	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG051820.1