PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG051500.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 246aa MW: 26322.3 Da PI: 6.697

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG051500.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	169.5	4e-53	29	125	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 vreqdr++Pianv+rim++vlP +akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa++ lGf+dyvepl++yl+++re+ TRIDC6BG051500.2 29 VREQDRLMPIANVIRIMRRVLPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSRLGFDDYVEPLSIYLHRFREF 121 69******************************************************************************************* PP NF-YB 94 egek 97 ege TRIDC6BG051500.2 122 EGEA 125 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MDMGFPGAAN GAAAAAAGNG SGGGQAPAVR EQDRLMPIAN VIRIMRRVLP PHAKISDDAK 60 ETIQECVSEY ISFITGEANE RCQREQRKTI TAEDVLWAMS RLGFDDYVEP LSIYLHRFRE 120 FEGEARGAGV GHHHHGMPPM MLKPRGAPGP MVPHGDMQMH AAGMYGGGAM PPHPHHPFHM 180 PAHHGQYPQY EMYGGEHGMA AYYGGPYAPG NGGNNGDGSG SSGNGHGGES TPPAGNFEHH 240 QTFGYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	2e-61	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG051500.2