PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG050500.15 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 116aa MW: 12502.5 Da PI: 8.5774 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 27.1 | 7.2e-09 | 19 | 40 | 4 | 26 |
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 ++C+ fa+ GtC+yG +C+ +Hg TRIDC6BG050500.15 19 PICS-FAAAGTCPYGKKCPQMHG 40 5788.*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence |
MSSALTAQNQ APHPLAHLPI CSFAAAGTCP YGKKCPQMHG DLCTTCGKQC LHPYRPSEGG 60 AHIKLCKRNN KRLEALKKSE EIECSVCLDR VLSKPTAAEK SQGLSNMPQS LVLCHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G08505.1 | 2e-37 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG050500.15 |