PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC6BG048340.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 198aa MW: 21378.2 Da PI: 10.2226

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG048340.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.8	4.4e-24	74	118	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC +++ +++k+CErH+hrgr+rsrk++e+ TRIDC6BG048340.9 74 DPEPGRCRRTDGKKWRCAKEAASDSKYCERHMHRGRNRSRKPVET 118 79****************************************997 PP
2	QLQ	62.8	9.3e-22	12	47	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ ++L++Q+l+yKyL+a++PvPp+L+++i++ TRIDC6BG048340.9 12 PFTAAQYEELEHQALIYKYLVAGVPVPPDLVLPIRR 47 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
RMAGRWMARP APFTAAQYEE LEHQALIYKY LVAGVPVPPD LVLPIRRGIE TLAARFYHNP 60 LAIGYGSYLG KKVDPEPGRC RRTDGKKWRC AKEAASDSKY CERHMHRGRN RSRKPVETQL 120 VSHSQPPAAS VVPPLATGFH NHSLYPAIGG TNGGGGGGNN GMPNTFSSAL GPPQQHMGNN 180 ASSPYAALGG AGTCKDFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-47	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG048340.9