PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC6BG048340.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 357aa MW: 38411.6 Da PI: 8.4527

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG048340.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.5	1.1e-23	73	117	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC +++ +++k+CErH+hrgr+rsrk++e+ TRIDC6BG048340.6 73 DPEPGRCRRTDGKKWRCAKEAASDSKYCERHMHRGRNRSRKPVET 117 79****************************************997 PP
2	QLQ	61.5	2.2e-21	11	46	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ ++L++Q+l+yKyL+a++PvPp+L+++i++ TRIDC6BG048340.6 11 PFTAAQYEELEHQALIYKYLVAGVPVPPDLVLPIRR 46 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MAGRWMARPA PFTAAQYEEL EHQALIYKYL VAGVPVPPDL VLPIRRGIET LAARFYHNPL 60 AIGYGSYLGK KVDPEPGRCR RTDGKKWRCA KEAASDSKYC ERHMHRGRNR SRKPVETQLV 120 SHSQPPAASV VPPLATGFHN HSLYPAIGGT NGGGGGGNNG MPNTFSSALG PPQQHMGNNA 180 SSPYAALGGA GTCKDFRYTA YGIRSLADEH SQLMTEAMNT SVENPWRLPP SSQTTTFPLS 240 SYAPQLGATS DLGQNNNSSS SNSAVKSERQ QQQQPLSFPG CGDFGGGGAM DSAKQENQTL 300 RPFFDEWPKT RDSWSDLTDD NSSLASFSAT QLSISIPMTS SDFSAASSQS PNGMLFA

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MAGRWMARPA PFTAAQYEEL EHQALIYKYL VAGVPVPPDL VLPIRRGIET LAARFYHNPL  60
AIGYGSYLGK KVDPEPGRCR RTDGKKWRCA KEAASDSKYC ERHMHRGRNR SRKPVETQLV  120
SHSQPPAASV VPPLATGFHN HSLYPAIGGT NGGGGGGNNG MPNTFSSALG PPQQHMGNNA  180
SSPYAALGGA GTCKDFRYTA YGIRSLADEH SQLMTEAMNT SVENPWRLPP SSQTTTFPLS  240
SYAPQLGATS DLGQNNNSSS SNSAVKSERQ QQQQPLSFPG CGDFGGGGAM DSAKQENQTL  300
RPFFDEWPKT RDSWSDLTDD NSSLASFSAT QLSISIPMTS SDFSAASSQS PNGMLFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-46	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG048340.6