PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG048270.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 280aa MW: 30914 Da PI: 8.9705

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG048270.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	23	77	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LHerFveav++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYR+ TRIDC6BG048270.1 23 KPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRM 77 79****************************************************7 PP
2	Myb_DNA-binding	69.7	4.7e-22	25	76	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++v+av++lGg+ t+k++ r mg kg+tl+++ks++qky+ TRIDC6BG048270.1 25 RLRWTPDLHERFVEAVTKLGGPdkaTPKSVLRLMGmKGLTLYHLKSHLQKYR 76 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MFEGMERAGY GVGAGVVLSR DPKPRLRWTP DLHERFVEAV TKLGGPDKAT PKSVLRLMGM 60 KGLTLYHLKS HLQKYRMGKQ SKKDTGFETN RGAFAAQGIS FSSAVPQNVP SAGNNNMGET 120 PLADALRYQI EVQRKLHEQL EVQKKLQMRI EAQGKYLQTI LEKAQKNLSY EAGADANLET 180 TRSQLTDFNL ALSGFMDDAT QACQQNGGEL AKALSDDSLR AGNLGFQLYH GVHDGEDVKC 240 ATDEDLLLLD LNIKGGYDHR LSSHGMRRGA VDLTVGQHRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	2e-65	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG048270.1