PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG048220.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 459aa MW: 50956 Da PI: 5.2085

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG048220.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.9	3.7e-13	261	307	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +a+ + E+ RR++iN ++ Lr+llP++ +K++ a+i+ A+eYI++L TRIDC6BG048220.11 261 KANFATEKERREQINVKYGALRSLLPSP-----TKNDRASIVGDAIEYINEL 307 68999*********************.....9*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MIAEGGYFDG SRDAILMAGS LIHDSLDSIC DSTEIEQGNF HGPSFFIEDI CNPTNLTSES 60 ARTINHIQHR AEFDMDQDLH GHMIQETQVE TSNWVPAMFG TQNHIISQQS IEQQMDDYDA 120 ASYPDGAHTA APDLLNLLQI PRYSMTTAFL STEHIFGDPG QNAGNQLDIN NDVLGRAIHD 180 SGMMLGDSTL PLQYNGNQSH LFKDLYHSLP QSFGLFSSDD ERDRTMGVVG AAGNILQEID 240 GRQFGSPKLG RSKKGGFGKA KANFATEKER REQINVKYGA LRSLLPSPTK NDRASIVGDA 300 IEYINELNRT LKELTSLVEG DTKHRMKRLK LDDAARDNGE SSSLQQVKDD QDSQLNGAIR 360 SSWIQRRSKE CHVDVRIVGN EINIKFTEKK KTNSLLCAAK VIDEFRLELI HVVGGIIGDQ 420 RIFMFNTKIS EGSSVYASAL ASKLLRAMEM EHLAVDIFS

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MIAEGGYFDG SRDAILMAGS LIHDSLDSIC DSTEIEQGNF HGPSFFIEDI CNPTNLTSES  60
ARTINHIQHR AEFDMDQDLH GHMIQETQVE TSNWVPAMFG TQNHIISQQS IEQQMDDYDA  120
ASYPDGAHTA APDLLNLLQI PRYSMTTAFL STEHIFGDPG QNAGNQLDIN NDVLGRAIHD  180
SGMMLGDSTL PLQYNGNQSH LFKDLYHSLP QSFGLFSSDD ERDRTMGVVG AAGNILQEID  240
GRQFGSPKLG RSKKGGFGKA KANFATEKER REQINVKYGA LRSLLPSPTK NDRASIVGDA  300
IEYINELNRT LKELTSLVEG DTKHRMKRLK LDDAARDNGE SSSLQQVKDD QDSQLNGAIR  360
SSWIQRRSKE CHVDVRIVGN EINIKFTEKK KTNSLLCAAK VIDEFRLELI HVVGGIIGDQ  420
RIFMFNTKIS EGSSVYASAL ASKLLRAMEM EHLAVDIFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06170.2	3e-48	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG048220.11