PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG047910.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 356aa MW: 38226 Da PI: 8.5054

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG047910.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102	3.8e-32	172	225	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ TRIDC6BG047910.3 172 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 225 9****************************************************7 PP
2	Myb_DNA-binding	49	1.4e-15	173	224	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ TRIDC6BG047910.3 173 RMRWTTSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 224 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MELFPSHPDL QPQLQISPPP ATKPMDLGFW KRALDTTAAA AAATSASAAA TFTPPSIART 60 YPSAPAAAGG GFHAAHYGVA DGHLGGLQFL QHTQPILHEV QDLAAMKPIR GIPVYNTSQS 120 LPFLQSQLHH HNHHHQHCYD AIGGAAGGPR SPGKVGALRL AAPPAKRNSR APRMRWTTSL 180 HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTIKTTD HKPAAASSYG 240 QAKTIIDIPD DSSFDIANTS GSESSVQQSN LDGNEHGSNM CALWSNNSRY RGAWSFHGKS 300 RSDANPGDIK SFEDVQSQCP NVVADDAADL MSAPFRLSEL VVGAKKPNLD FTLGRM

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MELFPSHPDL QPQLQISPPP ATKPMDLGFW KRALDTTAAA AAATSASAAA TFTPPSIART  60
YPSAPAAAGG GFHAAHYGVA DGHLGGLQFL QHTQPILHEV QDLAAMKPIR GIPVYNTSQS  120
LPFLQSQLHH HNHHHQHCYD AIGGAAGGPR SPGKVGALRL AAPPAKRNSR APRMRWTTSL  180
HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTIKTTD HKPAAASSYG  240
QAKTIIDIPD DSSFDIANTS GSESSVQQSN LDGNEHGSNM CALWSNNSRY RGAWSFHGKS  300
RSDANPGDIK SFEDVQSQCP NVVADDAADL MSAPFRLSEL VVGAKKPNLD FTLGRM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17695.1	8e-41	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG047910.3