PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG047700.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 330aa    MW: 35574.8 Da    PI: 4.3788
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG047700.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.2e-171663148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT++Ed +l+ +++++G  +W++ +r  g+ R++k+c++rw +yl
  TRIDC6BG047700.2 16 RGSWTPQEDMRLIAYIQKHGHANWRALPRQAGLLRCGKSCRLRWINYL 63
                      89******************************99************97 PP
2Myb_DNA-binding51.52.3e-1669114148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T+eE+   ++++++lG++ W++Ia++++ gRt++++k+ w+++l
  TRIDC6BG047700.2  69 RGNFTAEEEATVIKLHALLGNK-WSKIAACLP-GRTDNEIKNVWNTHL 114
                       89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGRGRAPCCA KVGLNRGSWT PQEDMRLIAY IQKHGHANWR ALPRQAGLLR CGKSCRLRWI  60
NYLRPDLRRG NFTAEEEATV IKLHALLGNK WSKIAACLPG RTDNEIKNVW NTHLKKKASE  120
QKPGVGESKG EAADGDPDTP APSLSSASSS MTTSDGSNGG AGEQCGTSNE PETINVPSPL  180
ELELEPVMDI LDMLADEPTE AFATAAPMPT SSCSSSSLTT CAGGGGGVEE LLELPDIDMD  240
ADIWSIIDDD VARLQQGDAT VPCTTKEGSE WWLEDLEKEL GLWGPAEESQ PQAGPLDQIG  300
YPGQLYETEG DMVMGPIGCT RSNITTWRSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79180.13e-66MYB family protein