PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG047700.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 393aa    MW: 41819.6 Da    PI: 4.5129
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG047700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.2e-081521762348
                       -HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  23 tWktIartmgkgRtlkqcksrwqkyl 48 
                       +W++Ia++++ gRt++++k+ w+++l
  TRIDC6BG047700.1 152 RWSKIAACLP-GRTDNEIKNVWNTHL 176
                       6*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
PPPPRPGPIE LEQASRVVWS GGRYGARQGT VLRQGRAEQG LLDAAGGHAP HRLHPEARAR  60
QLARPPEAGR PAALREELPA PVDQLPAPRP QARQLHRRGG GHRHQAARLA RQQVSLICLH  120
SVRQSVLEIV GRALIGPGVV AGVLMDFCYL FRWSKIAACL PGRTDNEIKN VWNTHLKKKA  180
SEQKPGVGES KGEAADGDPD TPAPSLSSAS SSMTTSDGSN GGAGEQCGTS NEPETINVPS  240
PLELELEPVM DILDMLADEP TEAFATAAPM PTSSCSSSSL TTCAGGGGGV EELLELPDID  300
MDADIWSIID DDVARLQQGD ATVPCTTKEG SEWWLEDLEK ELGLWGPAEE SQPQAGPLDQ  360
IGYPGQLYET EGDMVMVSSC PPSRSDHEAS NSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.13e-11MYB_related family protein