PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG047470.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 320aa MW: 34478.9 Da PI: 7.1777 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.8 | 4e-13 | 74 | 125 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P++ + ++ + a+i+ A++++k+L+ TRIDC6BG047470.5 74 QRMTHIAVERNRRRQMNEYLVVLRSLMPES---YVQRGDQASIVGGAIDFVKELE 125 79****************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence |
ALVDALCASS VDNAALVYST FNAAGFLFDN AAGFYDGTGI ADGPKQSTSS PAPPRRKRRR 60 RARSCKSREE TECQRMTHIA VERNRRRQMN EYLVVLRSLM PESYVQRGDQ ASIVGGAIDF 120 VKELEQQLQS LEAQKRTLAH YQQHKAGCDA TPLPAAMPTR ASTSGGNACV ESTSNCSSSV 180 TEADGASDAP PFAGFFTYPQ YVWRQSPRDA TTLSADESRA GVADIEVNLV ETHASLRVMA 240 PRRPGQLLRM VAGLQALRLT VLHLNVTALD SLLLYSLSLK VEEGCGLTTA DDIAAAVHHV 300 LCFIHAEAGA ASQQLLAPAQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 55 | 61 | RRKRRRR |
2 | 56 | 60 | RKRRR |
3 | 56 | 63 | RKRRRRAR |
4 | 75 | 86 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 3e-59 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG047470.5 |