PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG047470.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 346aa MW: 36943.7 Da PI: 6.7026

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG047470.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.5e-13	100	151	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P++ + ++ + a+i+ A++++k+L+ TRIDC6BG047470.2 100 QRMTHIAVERNRRRQMNEYLVVLRSLMPES---YVQRGDQASIVGGAIDFVKELE 151 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
AMALVDALCA SSVDNAALVY STFNAAGFLF DNAAGFYDGT GIADGPALAL QAADRAPGLS 60 AAGDVAPCLE KQSTSSPAPP RRKRRRRARS CKSREETECQ RMTHIAVERN RRRQMNEYLV 120 VLRSLMPESY VQRGDQASIV GGAIDFVKEL EQQLQSLEAQ KRTLAHYQQH KAGCDATPLP 180 AAMPTRASTS GGNACVESTS NCSSSVTEAD GASDAPPFAG FFTYPQYVWR QSPRDATTLS 240 ADESRAGVAD IEVNLVETHA SLRVMAPRRP GQLLRMVAGL QALRLTVLHL NVTALDSLLL 300 YSLSLKVEEG CGLTTADDIA AAVHHVLCFI HAEAGAASQQ LLAPAQ

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

AMALVDALCA SSVDNAALVY STFNAAGFLF DNAAGFYDGT GIADGPALAL QAADRAPGLS  60
AAGDVAPCLE KQSTSSPAPP RRKRRRRARS CKSREETECQ RMTHIAVERN RRRQMNEYLV  120
VLRSLMPESY VQRGDQASIV GGAIDFVKEL EQQLQSLEAQ KRTLAHYQQH KAGCDATPLP  180
AAMPTRASTS GGNACVESTS NCSSSVTEAD GASDAPPFAG FFTYPQYVWR QSPRDATTLS  240
ADESRAGVAD IEVNLVETHA SLRVMAPRRP GQLLRMVAGL QALRLTVLHL NVTALDSLLL  300
YSLSLKVEEG CGLTTADDIA AAVHHVLCFI HAEAGAASQQ LLAPAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	87	RRKRRRR
2	82	86	RKRRR
3	82	89	RKRRRRAR
4	101	112	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	5e-59	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG047470.2