PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG046710.15
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 302aa    MW: 33380.8 Da    PI: 10.1465
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG046710.15genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.61.4e-1379123147
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6BG046710.15  79 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 123
                        789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
AATTQADAAA LRTKANLSPP PVQRARDRHR HPTEPGLRAF HMVSTNPPLP PALSEAAAAV  60
SGDDASKKVR KPYTITKSRE SWTEQEHDKF LEALQLFDRD WKKIEAFVGS KTVIQIRSHA  120
QKYFLKVQKN GTSEHVPPPR PKRKAAHPYP QKASKNEPGY ALKTDPSAML RNSGMNVAVS  180
PWTHNSIPPV VASSFMKDLG AGSMGPNIFC SSSSEGPPRA WQSGETNDQI NQVPSLRIMP  240
DFAQVYSFLG SVFDPSTKGH LQKLKEMNPI DVETALLLMR NLSINLTSPD FEDQVSSYPT  300
FR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.25e-85MYB_related family protein