PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG046710.14
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 262aa    MW: 29043.9 Da    PI: 9.508
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG046710.14genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-133882147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6BG046710.14 38 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 82
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MVSTNPPLPP ALSEAAAAVS GDDASKKVRK PYTITKSRES WTEQEHDKFL EALQLFDRDW  60
KKIEAFVGSK TVIQIRSHAQ KYFLKVQKNG TSEHVPPPRP KRKAAHPYPQ KASKNEPGYA  120
LKTDPSAMLR NSGMNVAVSP WTHNSIPPVV ASSFMKEDLG AGSMGPNIFC SSSSEGPPRA  180
WQSGETNDQI NQVPSLRIMP DFAQVYSFLG SVFDPSTKGH LQKLKEMNPI DVETALLLMR  240
NLSINLTSPD FEDQVSSYPT FR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.12e-86MYB_related family protein