PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG045540.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 265aa    MW: 28212 Da    PI: 6.1764
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG045540.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-18102152155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+ +++g
  TRIDC6BG045540.1 102 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAAVAIKG 152
                       57*****887.**********843...6*********************998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
HHLPSPAWSL VWCSLVERTR AMESDTIHAP ATSSSSSYSS DSTAINGVHD VSKSEPKHLK  60
RKRQTATSPA APGTGSQEAE ARAEESSSCT AAADERTAGR HPSYRGVRRR SWGKWVSEIR  120
EPRKKSRIWL GTFPTAEMAA RAHDVAAVAI KGRRAHLNFP HLADALPRPA STSPADIQAA  180
AASAAAQCES SSSVAETTET PTTSTETSAA SSGTAGSVEE NALFDLPDLL LDLRDGLWCS  240
PTWATAADDY DGGEAALHEP LLWVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-27ERF family protein