PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG045110.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 700aa    MW: 73211.1 Da    PI: 6.2699
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG045110.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS280.84.1e-863426993374
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       + L ++A+a ++g+ + a+++Larl+++  p g+p+ R a+y+ eAL   la+      +  +++ ts+ +++ +laa+k fs++sP+l+f++
  TRIDC6BG045110.2 342 DELAAAAKAAEAGNSTGAREILARLNHQLPPLGKPFLRSASYLREALLLALAD-----GHHGASRITSPLDVALKLAAYKSFSDLSPMLQFAN 429
                       7899*************************************************.....444455556666799******************** PP

              GRAS  96 ltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
                       +ta qa+l++++ +  +++H+iDfd++ G+QW+++lq+La R+       p l++T+++s +s++  el+ t+++L++fA+ lg+pfefn++ 
  TRIDC6BG045110.2 430 FTATQALLDEIACSaaSCIHVIDFDLGVGGQWASFLQELAHRRgtggVALPLLKLTAFVSDASHHPLELHLTQDNLTQFAADLGIPFEFNAV- 521
                       *********988776699************************976544599****************************************8. PP

              GRAS 183 akrledleleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                         +l+++++ eL   + +E +aV+l +          +l+     +L+lvk+l Pk+vv ++  ad+ + +F ++fl++++ ++ l+dsl+a 
  TRIDC6BG045110.2 522 --SLDAFSPAELISPTgDEIVAVSLPVGCSARA---PPLAV----ILRLVKQLGPKIVVAMDYGADRADLPFSQHFLHCFQSCMFLLDSLDAA 605
                       ..99********666689********9777665...55555....*********************************************888 PP

              GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpL 367
                        + +++ + k+E++l++++++++v  + +       ++ +Wr+ + +aGF+pvpls+ a++qa++ll++v+++g++ve++  +l+l+W++ +L
  TRIDC6BG045110.2 606 -GIDADSACKIEKFLIQPRVEDAVLGRRKT-----DKAVSWRNVFAAAGFTPVPLSNLAEAQADCLLKRVQVRGFHVEKRGVALTLYWQRGEL 692
                       .7899*******************987776.....7889****************************************************** PP

              GRAS 368 vsvSaWr 374
                       vsvSaWr
  TRIDC6BG045110.2 693 VSVSAWR 699
                       ******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 700 aa     Download sequence    
MRAALFGAER SGGVGLAGGK DLCYWPPGKL LVEPRSVLDC SRRLSSPPNS ASTLSSSLGG  60
GAADSTGVAA VSESSAGDAE ATKWADHGAG AGGCELPPIP GALDGGEGWD AMLGNAAAAA  120
AAGQDQTFLN WIMGAAGDLE LPVPPLPMHQ QPLVDNAGGF GFSAVDPLGF SLDHHLGGAS  180
SDLSSSGAMS HTTTGGGGGG ASKASSAFGL FSPEAASLQP PPPPMLFHEG IDTKPPLLGP  240
QSHGLFNHYQ YQPPPPAAAF FMPLSSISDH NQRSQLHQPP PKRHHSVPDD LYLTRNHLGT  300
SAAAAFPLLH GSLPFQLQPS PPPLRGAMKT TAAEAAQQQL LDELAAAAKA AEAGNSTGAR  360
EILARLNHQL PPLGKPFLRS ASYLREALLL ALADGHHGAS RITSPLDVAL KLAAYKSFSD  420
LSPMLQFANF TATQALLDEI ACSAASCIHV IDFDLGVGGQ WASFLQELAH RRGTGGVALP  480
LLKLTAFVSD ASHHPLELHL TQDNLTQFAA DLGIPFEFNA VSLDAFSPAE LISPTGDEIV  540
AVSLPVGCSA RAPPLAVILR LVKQLGPKIV VAMDYGADRA DLPFSQHFLH CFQSCMFLLD  600
SLDAAGIDAD SACKIEKFLI QPRVEDAVLG RRKTDKAVSW RNVFAAAGFT PVPLSNLAEA  660
QADCLLKRVQ VRGFHVEKRG VALTLYWQRG ELVSVSAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-89GRAS family protein