PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC6BG043720.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 217aa MW: 22661.4 Da PI: 5.5282

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG043720.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.8	8.1e-07	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ + + ++ fC ++ lC+ C H+ H+ TRIDC6BG043720.3 4 QCDVCAAEAASVFCCADEAALCDACDRRVHRAnklagkHR 43 7*****************************7677777776 PP
2	zf-B_box	26.8	1e-08	58	90	3	35
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHk 35 ++ C+ ++ek+ lfC++++ lC++C ++ H TRIDC6BG043720.3 58 PPLCDICQEKRGFLFCKEDRAILCRECDVSVHA 90 689***************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MKVQCDVCAA EAASVFCCAD EAALCDACDR RVHRANKLAG KHRRFSLLNP SPSASMPPPL 60 CDICQEKRGF LFCKEDRAIL CRECDVSVHA ASELSMRHAR FLLTGVRVSS EPAASPAPPS 120 EEENTSSHCC SGDDDAAPAT SHGASSGSSI SEYLTKTLPG WHVEDFLVDD ATAAAAAAAA 180 SAGFSSGGSY PLAHTGPVCC SSDSILRGPP RSTILDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	5e-35	DBB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG043720.3