PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG043710.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 240aa    MW: 25976.6 Da    PI: 10.8275
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG043710.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.21.3e-19169203135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+ kTp+WR gp+g ktLCnaCG+++++ +l
  TRIDC6BG043710.3 169 CSHCGVQKTPQWRAGPEGAKTLCNACGVRFKSGRL 203
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
AHDAEELEWV SRIMDDSQAE LPPPPQLPAP AAWPPQHRQP QESTVPAVDP MRTPTICALS  60
TEALVPVRSK KRSKRSRGTT VWSLSGASIS DSASSSATSS SCSSSASLSS FFLMDSPTFN  120
LLDEPPRTKS KSKKSKHKAK KRGRKPKSHL PPQLSGGAAS PPGQGDRRCS HCGVQKTPQW  180
RAGPEGAKTL CNACGVRFKS GRLLPEYRPA CSPTFVGNVH SNSHRKVLEM RRKKDPVPVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-40GATA family protein