PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC6BG043350.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 278aa MW: 29987.8 Da PI: 7.1667

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG043350.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.6e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd ++ G g+W++ ++ ++R++k+c++rw +yl TRIDC6BG043350.2 14 KGPWTPEEDKQLVDFIQANGHGSWRLLPKLAELNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	49.1	1.4e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +v+++ G++ W+ Ia+ ++ gRt++++k++w+++l TRIDC6BG043350.2 67 RGPFTAEEQKSIVQLHGIVGNK-WSMIAAQLP-GRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MGRAPCCDRK GLKKGPWTPE EDKQLVDFIQ ANGHGSWRLL PKLAELNRCG KSCRLRWTNY 60 LRPDIKRGPF TAEEQKSIVQ LHGIVGNKWS MIAAQLPGRT DNEIKNYWNT HLKKQLRRMG 120 LDEPPPGPTA GCPAARHMAQ WETARLEAEA RLSLLSSSGA AATATTSGSA SSSSTAAAGA 180 AVAEHAKPAD VFLRLWNSDI GSSFRKAAAP VSVKEEEAVV PGDDSSAASN EMDAAAAEYQ 240 MFLDFAGEEL GLFHGRHGGF SLFPPLDVLA EASLDTAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	8e-73	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG043350.2