PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG042880.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 210aa    MW: 22092.8 Da    PI: 9.6308
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG042880.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP110.62.2e-3451145889
               TCP   8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............ 88 
                        +++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++tieWLl+qa+p+i ++tgt++++a ++++++ s s   +ss+            
  TRIDC6BG042880.1  51 VKDRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSILAATGTGTTPAAFVSSSAPSTS---PSSSfsyphtllgkrp 140
                       59********************************************************9999966622111111...1222122333333333 PP

               TCP  89 ....k 89 
                           +
  TRIDC6BG042880.1 141 reeeN 145
                       33330 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
SVDAMTSHDI AAASGPFHVY QQQLPITMAP AAAAADAGLA PATSKKAGGS VKDRHSKVNG  60
RGRRVRMPIV CAARVFQLTR ELGLKSDGQT IEWLLRQAEP SILAATGTGT TPAAFVSSSA  120
PSTSPSSSFS YPHTLLGKRP REEENDAFGA GAATSAFWAA LQAPPRQDTW GLSPLDAQAA  180
YMPMAQVHHH HLNLVAALSG AARRTEEESR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.13e-29TCP family protein