PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG040150.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 749aa MW: 84442.6 Da PI: 9.0069

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG040150.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.4	2e-07	32	73	49	90
FAR1 49 ekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 e + r+r+++ t+C a+++vk++ d+ +v+ +l+HnH+++ TRIDC6BG040150.6 32 EPKFRKRTSSTTNCPARIRVKLWGDKLLHVELANLDHNHPVS 73 5677899********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 749 aa Download sequence
MDRTLAFQKL AWCSITTWRS TDSTVGGRPR YEPKFRKRTS STTNCPARIR VKLWGDKLLH 60 VELANLDHNH PVSPAMARFL NSYKQLSGPA KRRLRMGGPG AMPVEEPSKM PVDKLGALEE 120 LLFGESKNHS FVERGRLKLQ PGDSEALRLF FTRMQAKNAN FFNVIDLDDE GCVRNVFWAD 180 AWSRAMYEYY NDTITLDTSY VVSKHDMPLV TFLGVNHHGQ SVLLGCGLLS DETAETYTWL 240 FKAWVACMSG NLPKAIITDQ CRGIQSAVAE VVPGVRHRIC LHQIMKKAAD QLSGLSEYKA 300 ISKALQKAAY DSLTVDEFEG EWSTLITYNG LQGHDWLRSL YECRFSWVPI FLKDAFWAGM 360 SATQRSETIT PFFEGYVDLK TSLKQFLGKY EMILQSKYEK EAQADFETFH KQRPPVSKFY 420 MEEQLSKVYT HNIFKKFQDE IEAIMYCHVS LMNGDGPIST FNVKECIFLE DGKRTMSKIF 480 AVTYNTEEKD ITCICGGFQF SGILCRHSLS VLKFQQVREV PSQYVLDRWK KDFRQLHVMG 540 RLSSDVVPDN RVDRYDYLSM RCLQLVDSAV LSDKYRLALR LVREVEKFLL NSNTHDDTQP 600 RIKSRIPKVK PNTVTGQNLV NVVTDNGSGP KGPEASASAQ ASQIQKGVAE KAVVPAGYIG 660 VPANVQQFMG NQAAMRPSIV YMVPSGVDPQ AFGNGVLMPV MYQQMFQIPQ QPNGAAQDTL 720 ANGKRKRPRG QKPTETSHQS NGTSGPAAG

Sequence ? help Back to Top

Protein Sequence Length: 749 aa Download sequence

MDRTLAFQKL AWCSITTWRS TDSTVGGRPR YEPKFRKRTS STTNCPARIR VKLWGDKLLH  60
VELANLDHNH PVSPAMARFL NSYKQLSGPA KRRLRMGGPG AMPVEEPSKM PVDKLGALEE  120
LLFGESKNHS FVERGRLKLQ PGDSEALRLF FTRMQAKNAN FFNVIDLDDE GCVRNVFWAD  180
AWSRAMYEYY NDTITLDTSY VVSKHDMPLV TFLGVNHHGQ SVLLGCGLLS DETAETYTWL  240
FKAWVACMSG NLPKAIITDQ CRGIQSAVAE VVPGVRHRIC LHQIMKKAAD QLSGLSEYKA  300
ISKALQKAAY DSLTVDEFEG EWSTLITYNG LQGHDWLRSL YECRFSWVPI FLKDAFWAGM  360
SATQRSETIT PFFEGYVDLK TSLKQFLGKY EMILQSKYEK EAQADFETFH KQRPPVSKFY  420
MEEQLSKVYT HNIFKKFQDE IEAIMYCHVS LMNGDGPIST FNVKECIFLE DGKRTMSKIF  480
AVTYNTEEKD ITCICGGFQF SGILCRHSLS VLKFQQVREV PSQYVLDRWK KDFRQLHVMG  540
RLSSDVVPDN RVDRYDYLSM RCLQLVDSAV LSDKYRLALR LVREVEKFLL NSNTHDDTQP  600
RIKSRIPKVK PNTVTGQNLV NVVTDNGSGP KGPEASASAQ ASQIQKGVAE KAVVPAGYIG  660
VPANVQQFMG NQAAMRPSIV YMVPSGVDPQ AFGNGVLMPV MYQQMFQIPQ QPNGAAQDTL  720
ANGKRKRPRG QKPTETSHQS NGTSGPAAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-130	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG040150.6