PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG040150.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 830aa MW: 93920.5 Da PI: 9.4666

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG040150.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.2	2.3e-17	71	154	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA++vGF v++++s+ s ++g++ +++C k g+++ e k r+r+++ t+C a+++vk++ d+ +v+ +l+HnH+++ TRIDC6BG040150.4 71 RFYRRYARRVGFGVSVRRSSFS-QEGTCLYLELMCCKGGRPRYEPKF-----RKRTSSTTNCPARIRVKLWGDKLLHVELANLDHNHPVS 154 5***************9999.6677************9988.....99999****************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 830 aa Download sequence
PHPLPNPSRP RRRWALRRWR RRGRPTLPRI PAAPGAATST HWDPYLEESD GQDIGIPEVG 60 MVFNNHMEVN RFYRRYARRV GFGVSVRRSS FSQEGTCLYL ELMCCKGGRP RYEPKFRKRT 120 SSTTNCPARI RVKLWGDKLL HVELANLDHN HPVSPAMARF LNSYKQLSGP AKRRLRMGGP 180 GAMPVEEPSK MPVDKLGALE ELLFGESKNH SFVERGRLKL QPGDSEALRL FFTRMQAKNA 240 NFFNVIDLDD EGCVRNVFWA DAWSRAMYEY YNDTITLDTS YVVSKHDMPL VTFLGVNHHG 300 QSVLLGCGLL SDETAETYTW LFKAWVACMS GNLPKAIITD QCRGIQSAVA EVVPGVRHRI 360 CLHQIMKKAA DQLSGLSEYK AISKALQKAA YDSLTVDEFE GEWSTLITYN GLQGHDWLRS 420 LYECRFSWVP IFLKDAFWAG MSATQRSETI TPFFEGYVDL KTSLKQFLGK YEMILQSKYE 480 KEAQADFETF HKQRPPVSKF YMEEQLSKVY THNIFKKFQD EIEAIMYCHV SLMNGDGPIS 540 TFNVKECIFL EDGKRTMSKI FAVTYNTEEK DITCICGGFQ FSGILCRHSL SVLKFQQVRE 600 VPSQYVLDRW KKDFRQLHVM GRLSSDVVPD NRVDRYDYLS MRCLQLVDSA VLSDKYRLAL 660 RLVREVEKFL LNSNTHDDTQ PRIKSRIPKV KPNTVTGQNL VNVVTDNGSG PKGPEASASA 720 QASQIQKGVA EKAVVPAGYI GVPANVQQFM GNQAAMRPSI VYMVPSGVDP QAFGNGVLMP 780 VMYQQMFQIP QQPNGAAQDT LANGKRKRPR GQKPTETSHQ SNGTSGPAAG

Sequence ? help Back to Top

Protein Sequence Length: 830 aa Download sequence

PHPLPNPSRP RRRWALRRWR RRGRPTLPRI PAAPGAATST HWDPYLEESD GQDIGIPEVG  60
MVFNNHMEVN RFYRRYARRV GFGVSVRRSS FSQEGTCLYL ELMCCKGGRP RYEPKFRKRT  120
SSTTNCPARI RVKLWGDKLL HVELANLDHN HPVSPAMARF LNSYKQLSGP AKRRLRMGGP  180
GAMPVEEPSK MPVDKLGALE ELLFGESKNH SFVERGRLKL QPGDSEALRL FFTRMQAKNA  240
NFFNVIDLDD EGCVRNVFWA DAWSRAMYEY YNDTITLDTS YVVSKHDMPL VTFLGVNHHG  300
QSVLLGCGLL SDETAETYTW LFKAWVACMS GNLPKAIITD QCRGIQSAVA EVVPGVRHRI  360
CLHQIMKKAA DQLSGLSEYK AISKALQKAA YDSLTVDEFE GEWSTLITYN GLQGHDWLRS  420
LYECRFSWVP IFLKDAFWAG MSATQRSETI TPFFEGYVDL KTSLKQFLGK YEMILQSKYE  480
KEAQADFETF HKQRPPVSKF YMEEQLSKVY THNIFKKFQD EIEAIMYCHV SLMNGDGPIS  540
TFNVKECIFL EDGKRTMSKI FAVTYNTEEK DITCICGGFQ FSGILCRHSL SVLKFQQVRE  600
VPSQYVLDRW KKDFRQLHVM GRLSSDVVPD NRVDRYDYLS MRCLQLVDSA VLSDKYRLAL  660
RLVREVEKFL LNSNTHDDTQ PRIKSRIPKV KPNTVTGQNL VNVVTDNGSG PKGPEASASA  720
QASQIQKGVA EKAVVPAGYI GVPANVQQFM GNQAAMRPSI VYMVPSGVDP QAFGNGVLMP  780
VMYQQMFQIP QQPNGAAQDT LANGKRKRPR GQKPTETSHQ SNGTSGPAAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-134	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG040150.4