PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG040150.13

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 735aa MW: 83094 Da PI: 9.0656

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG040150.13	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.1	2.4e-07	18	59	49	90
FAR1 49 ekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 e + r+r+++ t+C a+++vk++ d+ +v+ +l+HnH+++ TRIDC6BG040150.13 18 EPKFRKRTSSTTNCPARIRVKLWGDKLLHVELANLDHNHPVS 59 45678999*******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 735 aa Download sequence
FNNHMEVNRF YRGRPRYEPK FRKRTSSTTN CPARIRVKLW GDKLLHVELA NLDHNHPVSP 60 AMARFLNSYK QLSGPAKRRL RMGGPGAMPV EEPSKMPVDK LGALEELLFG ESKNHSFVER 120 GRLKLQPGDS EALRLFFTRM QAKNANFFNV IDLDDEGCVR NVFWADAWSR AMYEYYNDTI 180 TLDTSYVVSK HDMPLVTFLG VNHHGQSVLL GCGLLSDETA ETYTWLFKAW VACMSGNLPK 240 AIITDQCRGI QSAVAEVVPG VRHRICLHQI MKKAADQLSG LSEYKAISKA LQKAAYDSLT 300 VDEFEGEWST LITYNGLQGH DWLRSLYECR FSWVPIFLKD AFWAGMSATQ RSETITPFFE 360 GYVDLKTSLK QFLGKYEMIL QSKYEKEAQA DFETFHKQRP PVSKFYMEEQ LSKVYTHNIF 420 KKFQDEIEAI MYCHVSLMNG DGPISTFNVK ECIFLEDGKR TMSKIFAVTY NTEEKDITCI 480 CGGFQFSGIL CRHSLSVLKF QQVREVPSQY VLDRWKKDFR QLHVMGRLSS DVVPDNRVDR 540 YDYLSMRCLQ LVDSAVLSDK YRLALRLVRE VEKFLLNSNT HDDTQPRIKS RIPKVKPNTV 600 TGQNLVNVVT DNGSGPKGPE ASASAQASQI QKGVAEKAVV PAGYIGVPAN VQQFMGNQAA 660 MRPSIVYMVP SGVDPQAFGN GVLMPVMYQQ MFQIPQQPNG AAQDTLANGK RKRPRGQKPT 720 ETSHQSNGTS GPAAG

Sequence ? help Back to Top

Protein Sequence Length: 735 aa Download sequence

FNNHMEVNRF YRGRPRYEPK FRKRTSSTTN CPARIRVKLW GDKLLHVELA NLDHNHPVSP  60
AMARFLNSYK QLSGPAKRRL RMGGPGAMPV EEPSKMPVDK LGALEELLFG ESKNHSFVER  120
GRLKLQPGDS EALRLFFTRM QAKNANFFNV IDLDDEGCVR NVFWADAWSR AMYEYYNDTI  180
TLDTSYVVSK HDMPLVTFLG VNHHGQSVLL GCGLLSDETA ETYTWLFKAW VACMSGNLPK  240
AIITDQCRGI QSAVAEVVPG VRHRICLHQI MKKAADQLSG LSEYKAISKA LQKAAYDSLT  300
VDEFEGEWST LITYNGLQGH DWLRSLYECR FSWVPIFLKD AFWAGMSATQ RSETITPFFE  360
GYVDLKTSLK QFLGKYEMIL QSKYEKEAQA DFETFHKQRP PVSKFYMEEQ LSKVYTHNIF  420
KKFQDEIEAI MYCHVSLMNG DGPISTFNVK ECIFLEDGKR TMSKIFAVTY NTEEKDITCI  480
CGGFQFSGIL CRHSLSVLKF QQVREVPSQY VLDRWKKDFR QLHVMGRLSS DVVPDNRVDR  540
YDYLSMRCLQ LVDSAVLSDK YRLALRLVRE VEKFLLNSNT HDDTQPRIKS RIPKVKPNTV  600
TGQNLVNVVT DNGSGPKGPE ASASAQASQI QKGVAEKAVV PAGYIGVPAN VQQFMGNQAA  660
MRPSIVYMVP SGVDPQAFGN GVLMPVMYQQ MFQIPQQPNG AAQDTLANGK RKRPRGQKPT  720
ETSHQSNGTS GPAAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-131	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG040150.13