PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG040150.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 728aa MW: 83159.1 Da PI: 8.1139

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG040150.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.5	1.9e-17	49	132	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA++vGF v++++s+ s ++g++ +++C k g+++ e k r+r+++ t+C a+++vk++ d+ +v+ +l+HnH+++ TRIDC6BG040150.11 49 RFYRRYARRVGFGVSVRRSSFS-QEGTCLYLELMCCKGGRPRYEPKF-----RKRTSSTTNCPARIRVKLWGDKLLHVELANLDHNHPVS 132 5***************9999.6677************9988.....99999****************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 728 aa Download sequence
MVYPAKHLCC TCSDGSFLIQ DPYLEESDGQ DIGIPEVGMV FNNHMEVNRF YRRYARRVGF 60 GVSVRRSSFS QEGTCLYLEL MCCKGGRPRY EPKFRKRTSS TTNCPARIRV KLWGDKLLHV 120 ELANLDHNHP VSPAMARFLN SYKQLSGPAK RRLRMGGPGA MPVEEPSKMP VDKLGALEEL 180 LFGESKNHSF VERGRLKLQP GDSEALRLFF TRMQAKNANF FNVIDLDDEG CVRNVFWADA 240 WSRAMYEYYN DTITLDTSYV VSKHDMPLVT FLGVNHHGQS VLLGCGLLSD ETAETYTWLF 300 KAWVACMSGN LPKAIITDQC RGIQSAVAEV VPGVRHRICL HQIMKKAADQ LSGLSEYKAI 360 SKALQKAAYD SLTVDEFEGE WSTLITYNGL QGHDWLRSLY ECRFSWVPIF LKDAFWAGMS 420 ATQRSETITP FFEGYVDLKT SLKQFLGKYE MILQSKYEKE AQADFETFHK QRPPVSKFYM 480 EEQLSKVYTH NIFKKFQDEI EAIMYCHVSL MNGDGPISTF NVKECIFLED GKRTMSKIFA 540 VTYNTEEKDI TCICGGFQFS GILCRHSLSV LKFQQVREVP SQYVLDRWKK DFRQLHVMGR 600 LSSDVVPDNR VDRYDYLSMR CLQLVDSAVL SDKYRLALRL VREVEKFLLN SNTHDDTQPR 660 IKSRIPKVKP NTVTGQNLVN VVTDNGSGPK GPEASASAQA SQIQKVDWNK HQDFWCNTTS 720 SVETYSIV

Sequence ? help Back to Top

Protein Sequence Length: 728 aa Download sequence

MVYPAKHLCC TCSDGSFLIQ DPYLEESDGQ DIGIPEVGMV FNNHMEVNRF YRRYARRVGF  60
GVSVRRSSFS QEGTCLYLEL MCCKGGRPRY EPKFRKRTSS TTNCPARIRV KLWGDKLLHV  120
ELANLDHNHP VSPAMARFLN SYKQLSGPAK RRLRMGGPGA MPVEEPSKMP VDKLGALEEL  180
LFGESKNHSF VERGRLKLQP GDSEALRLFF TRMQAKNANF FNVIDLDDEG CVRNVFWADA  240
WSRAMYEYYN DTITLDTSYV VSKHDMPLVT FLGVNHHGQS VLLGCGLLSD ETAETYTWLF  300
KAWVACMSGN LPKAIITDQC RGIQSAVAEV VPGVRHRICL HQIMKKAADQ LSGLSEYKAI  360
SKALQKAAYD SLTVDEFEGE WSTLITYNGL QGHDWLRSLY ECRFSWVPIF LKDAFWAGMS  420
ATQRSETITP FFEGYVDLKT SLKQFLGKYE MILQSKYEKE AQADFETFHK QRPPVSKFYM  480
EEQLSKVYTH NIFKKFQDEI EAIMYCHVSL MNGDGPISTF NVKECIFLED GKRTMSKIFA  540
VTYNTEEKDI TCICGGFQFS GILCRHSLSV LKFQQVREVP SQYVLDRWKK DFRQLHVMGR  600
LSSDVVPDNR VDRYDYLSMR CLQLVDSAVL SDKYRLALRL VREVEKFLLN SNTHDDTQPR  660
IKSRIPKVKP NTVTGQNLVN VVTDNGSGPK GPEASASAQA SQIQKVDWNK HQDFWCNTTS  720
SVETYSIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-135	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG040150.11