PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC6BG039900.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | DBB | ||||||||
Protein Properties | Length: 257aa MW: 27743.3 Da PI: 4.8885 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19.1 | 2.7e-06 | 4 | 46 | 5 | 41 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ ++ ++ C ++ lC+ C + +H H++ p TRIDC6BG039900.3 4 QCDSCGVAAATVVCCADEAALCARCDVDIHAAnklaskHQRLP 46 7*****999*********************6678888888877 PP | |||||||
2 | zf-B_box | 27.1 | 8.5e-09 | 53 | 85 | 2 | 34 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeH 34 + ++C+ ++ek + +fC +++ l+C+dC + +H TRIDC6BG039900.3 53 KLPRCDICQEKAAFIFCVEDRALFCRDCDEPIH 85 5789**************************999 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 257 aa Download sequence |
MKIQCDSCGV AAATVVCCAD EAALCARCDV DIHAANKLAS KHQRLPLDAL GAKLPRCDIC 60 QEKAAFIFCV EDRALFCRDC DEPIHVPGTL SGNHQRYLAT GIRVGLGPVS ACAAGDHGAS 120 HDADHPAPPK LACEPQPPAQ PAASAQQVPS PPQFLPQDWG VDELLQFSDY ESSDKVLHKD 180 SALGFKELEW FTADMELFHD HAPKGGRATM EVPEFFASQA ADDAAYYRPS RVAATAGLRQ 240 SKKARVEIPD DEDFFIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G06040.1 | 7e-54 | DBB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC6BG039900.3 |