PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG039650.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 296aa    MW: 31069.4 Da    PI: 7.6918
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG039650.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.21.2e-12232277655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++Er RR ri +++ +L++l+P+     +k  s +++L +Ave+Ik Lq
  TRIDC6BG039650.3 232 SIAERERRTRISDKLRKLQDLVPNM----DKQTSTSDMLDLAVEHIKGLQ 277
                       689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MRRFLPAGAG EPSSSSSGPH GKHEGSEAAA AGGGLRYGGG DISLGRGNDL LHGQFRGGEG  60
EMKDDGADML ARHSSSPAGF FSNLMVDDGS RGAGVAGGSE AHRNTSSSTK MKSQLSFTAG  120
GPQTAAHLSR ISEGASLFPG AAAHPGGEHP VSRSFSASGS SGGFSIVGPW DESREIIGTL  180
DLGGYESQFS GMASSSSLEL AGMDKYMQAQ QQQDQVAFKV RAKRGCATHP RSIAERERRT  240
RISDKLRKLQ DLVPNMDKQT STSDMLDLAV EHIKGLQSQL QAMKHEQDKC TCCNKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.11e-44bHLH family protein